Jean P. Elbers 
www.rna-seqblog.com
Systematic assessment of diverse RNA modifications using nanopore direct RNA sequencing
Article de RNA-Seq Blog
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@sloboula.bsky.social
about 3 hours agoillumina (current king), PacBio, Oxford Nanopore, and several others
and in this space, patents are really important, and because of patents, there are companies in China doing really hot stuff that they can't sell in the US or Europe
so . . speculation:
because of patents, the US/Europe/Japan
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Department of Immunology and Infectious Diseases, Harvard T.H. C
@harvard-iid.bsky.social
about 3 hours agoMorgan’s thesis uses CRISPR–Cas9 editing, ring-stage survival assays, including a novel Nanopore-assisted approach, and drug susceptibility and competition assays to investigate artemisinin resistance in contemporary Senegalese parasites.
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New for #Nanoporeconf 26, the Tech Hub enables one‑to‑one discussions with Oxford Nanopore subject matter experts. Book meetings in advance to have targeted conversations that relate directly to your research questions and workflows, onsite.
Learn more: bit.ly/49koj56
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6/
Short reads used to dominate.
Illumina ruled the land.
But now PacBio and Nanopore are catching up.
Long-read is real. And it’s here.
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Upcoming seminar by Bregeon/Hamdane's lab: and Decrypter l'ARN dans sa complexite : l'apport du sequencage Nanopore at Paris RNA Club, Wednesday 20 May 2026 at 16:30. More info
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8/ Fig. 5 shows our attempt to resolve Peruvian amylase haplotypes with ONT long-read sequencing. Because the AMY1 locus is highly repetitive and structurally complex, ONT reads alone were not sufficient to fully assemble it. But we were able to answer two questions:
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Covalently functionalized MoS(2) nanopore with amino acids for label-free protein residue discrimination pubmed.ncbi.nlm.nih.gov/4…
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Organic Macrocycle as Highly Selective Adaptor for Nanopore Sensing of Aromatic Carboxylic Acids in Oilfield Produced Water pubmed.ncbi.nlm.nih.gov/4…
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Nanopore Discrimination of Protein-Small-Molecule Drug Complexes at Near-Atomic Resolution pubmed.ncbi.nlm.nih.gov/4…
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Nanopore Fingerprinting of Neurodegenerative Proteins and Phosphoproteins within a Minute pubmed.ncbi.nlm.nih.gov/4…
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Parts 1-2/2 — EFTA00583255.jpg
#epsteinweb #efta00583255
epsteinweb.org
Available in the iOS app store now!
apps.apple.com/us/app/eps…
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A #tricorder that you can buy today ... and they have already been to space astrobiology.com?s=nanopore #astrobiology #genomics #StarTrek #MinIon
#Nanopore
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Agreed. Crossing fingers we can get PCR level saturation of nanopore signal generators/analyzers within current generation!
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Performance test of QNome nanopore sequencer. Looks very interesting - I'm always on the lookout for alternate platforms for Binomica. More reason for us to build platform agnostic squiggle/QC tools for the future!
www.biorxiv.org/content/1….
🖥️🧬🧫🦠
www.biorxiv.org
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Error-corrected ONT reads can lower sequencing costs and improve the quality of #genomic analyses www.nature.com/articles/s41...
www.nature.com
Telomere-to-Telomere Assembly Using HERRO-Corrected Simplex Nanopore Reads - Nature
Nature - Telomere-to-Telomere Assembly Using HERRO-Corrected Simplex Nanopore Reads
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📖 Published📖
From short to long: The impact of read length on metagenome assembly and binning
These findings advocate for the integration of extended read lengths and Nanopore sequencing in metagenome analysis🖥️ 🧬
🔎
buff.ly
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Nanopore-based sequencing of active DNA replication reveals key principles of metazoan replication dynamics
#Drosophila
pubmed.ncbi.nlm.nih.gov
Nanopore-based sequencing of active DNA replication reveals key principles of metazoan replication dynamics #Drosophila
PubMed link
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Pseudouridylation landscape across 42 S. cerevisiae cytosolic tRNA isoacceptors via Nanopore direct RNA sequencing www.biorxiv.org/content/1…
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Pseudouridylation landscape across 42 S. cerevisiae cytosolic tRNA isoacceptors via Nanopore direct RNA sequencing www.biorxiv.org/content/1…
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Undetected drug-resistant TB doesn’t disappear. It survives, spreads, and comes back harder to treat. At #nanoporeconf, Carla Apaza will show how nanopore sequencing reveals hidden resistance, before it spreads. Check out the full agenda: bit.ly/4cSGe5c
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Interrogating the Escherichia coli epitranscriptome via CRISPR interference and Nanopore native RNA sequencing www.biorxiv.org/content/1….
www.biorxiv.org
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www.biorxiv.org/content/1…. Benchmarking Tools for Identification of rRNA Modifications in Escherichia coli using Oxford Nanopore Direct RNA Sequencing
www.biorxiv.org
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